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    LOC114769343 platelet glycoprotein V-like [ Denticeps clupeoides (denticle herring) ]

    Gene ID: 114769343, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC114769343
    Gene description
    platelet glycoprotein V-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Denticeps clupeoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Denticipitoidei; Denticipitidae; Denticeps
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    Genomic context

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    See LOC114769343 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current fDenClu1.1 (GCF_900700375.1) 19 NC_041725.1 (19202172..19204563)

    Chromosome 19 - NC_041725.1Genomic Context describing neighboring genes Neighboring gene NAD-dependent protein deacylase sirtuin-5, mitochondrial-like Neighboring gene coiled-coil domain-containing protein 50-like Neighboring gene regulator of G-protein signaling 21-like Neighboring gene regulator of G-protein signaling 21-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041725.1 Chromosome 19 Reference fDenClu1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: platelet glycoprotein V-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Denticeps clupeoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fDenClu1.1

    Genomic

    1. NC_041725.1 Reference fDenClu1.1

      Range
      19202172..19204563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028962275.1 → XP_028818108.1  LOW QUALITY PROTEIN: platelet glycoprotein V-like

      UniProtKB/TrEMBL
      A0A8C4C849
      Conserved Domains (3) summary
      PRK15370
      Location:95 → 315
      PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
      sd00033
      Location:97 → 120
      LRR_RI; leucine-rich repeat [structural motif]
      cl15307
      Location:422 → 453
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    Nucleotide Protein
    Heading Accession and Version

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