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    LOC115094722 titin-like [ Rhinatrema bivittatum (two-lined caecilian) ]

    Gene ID: 115094722, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC115094722
    Gene description
    titin-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhinatrema bivittatum
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
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    Genomic context

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    See LOC115094722 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current aRhiBiv1.1 (GCF_901001135.1) 6 NC_042620.1 (317954619..317975581)

    Chromosome 6 - NC_042620.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115093309 Neighboring gene probable E3 ubiquitin-protein ligase MID2 Neighboring gene uncharacterized LOC115094465 Neighboring gene uncharacterized LOC115094466 Neighboring gene uncharacterized LOC115094468

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042620.1 Chromosome 6 Reference aRhiBiv1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables complement component C3b binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of complement activation, alternative pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of interleukin-2 production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of macrophage activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    titin-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aRhiBiv1.1 Primary Assembly

    Genomic

    1. NC_042620.1 Reference aRhiBiv1.1 Primary Assembly

      Range
      317954619..317975581
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029607979.1 → XP_029463839.1  titin-like

      Conserved Domains (1) summary
      cl11960
      Location:163 → 270
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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