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    prlra prolactin receptor a [ Salmo trutta (river trout) ]

    Gene ID: 115149467, updated on 17-Mar-2024

    Summary

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    Gene symbol
    prlra
    Gene description
    prolactin receptor a
    See related
    Ensembl:ENSSTUG00000015242
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo trutta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
    Also known as
    prlr
    Orthologs
    zebrafish all
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    Genomic context

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    See prlra in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current fSalTru1.1 (GCF_901001165.1) 15 NC_042971.1 (59414435..59442452, complement)

    Chromosome 15 - NC_042971.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C21 Neighboring gene uncharacterized LOC115149466 Neighboring gene alanine--glyoxylate aminotransferase 2 Neighboring gene NEDD4 like E3 ubiquitin protein ligase Neighboring gene uncharacterized LOC115149469 Neighboring gene uncharacterized LOC115149471

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042971.1 Chromosome 15 Reference fSalTru1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cytokine receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prolactin receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSalTru1.1 Primary Assembly

    Genomic

    1. NC_042971.1 Reference fSalTru1.1 Primary Assembly

      Range
      59414435..59442452 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029692363.1 → XP_029548223.1  prolactin receptor

      UniProtKB/TrEMBL
      A0A673YM69

    2. XM_029692362.1 → XP_029548222.1  prolactin receptor

      UniProtKB/TrEMBL
      A0A673YM69
      Conserved Domains (2) summary
      cd00063
      Location:127 → 225
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam09067
      Location:21 → 120
      EpoR_lig-bind; Erythropoietin receptor, ligand binding

    3. XM_029692364.1 → XP_029548224.1  prolactin receptor

      UniProtKB/TrEMBL
      A0A673YM69
      Related
      ENSSTUP00000035743.1, ENSSTUT00000037350.1
    Nucleotide Protein
    Heading Accession and Version

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