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    nbr1b NBR1 autophagy cargo receptor b [ Salarias fasciatus (jewelled blenny) ]

    Gene ID: 115387172, updated on 17-Mar-2024

    Summary

    Gene symbol
    nbr1b
    Gene description
    NBR1 autophagy cargo receptor b
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salarias fasciatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Blenniimorphae; Blenniiformes; Blennioidei; Blenniidae; Salariinae; Salarias
    Orthologs
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    Genomic context

    See nbr1b in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current fSalaFa1.1 (GCF_902148845.1) 4 NC_043748.1 (24463700..24474694, complement)

    Chromosome 4 - NC_043748.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor-like 4D Neighboring gene transmembrane protein 106B-like Neighboring gene oxysterol-binding protein-related protein 7-like Neighboring gene TANK-binding kinase 1-binding protein 1-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_043748.1 Chromosome 4 Reference fSalaFa1.1 Primary Assembly

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in macroautophagy IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    LOW QUALITY PROTEIN: next to BRCA1 gene 1 protein-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Salarias fasciatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSalaFa1.1 Primary Assembly

    Genomic

    1. NC_043748.1 Reference fSalaFa1.1 Primary Assembly

      Range
      24463700..24474694 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030089777.1XP_029945637.1  LOW QUALITY PROTEIN: next to BRCA1 gene 1 protein-like

      Conserved Domains (5) summary
      cd06396
      Location:585
      PB1_NBR1; The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves ...
      PHA03247
      Location:564935
      PHA03247; large tegument protein UL36; Provisional
      cd14319
      Location:9731009
      UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
      cd14947
      Location:365476
      NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
      pfam17253
      Location:285320
      DUF5320; Family of unknown function (DUF5320)