U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC115440291 trypsin inhibitor [ Manduca sexta (tobacco hornworm) ]

    Gene ID: 115440291, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC115440291
    Gene description
    trypsin inhibitor
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Manduca sexta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC115440291 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current JHU_Msex_v1.0 (GCF_014839805.1) 18 NC_051132.1 (15410614..15412576, complement)
    100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942016.1 (848436..850774)

    Chromosome 18 - NC_051132.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115440285 Neighboring gene uncharacterized LOC119189697 Neighboring gene trypsin inhibitor-like Neighboring gene uncharacterized LOC119189687

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    trypsin inhibitor

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference JHU_Msex_v1.0 Primary Assembly

    Genomic

    1. NC_051132.1 Reference JHU_Msex_v1.0 Primary Assembly

      Range
      15410614..15412576 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030164534.2 → XP_030020394.2  trypsin inhibitor

      Conserved Domains (1) summary
      pfam00014
      Location:22 → 73
      Kunitz_BPTI; Kunitz/Bovine pancreatic trypsin inhibitor domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases