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    LOC115442845 uncharacterized LOC115442845 [ Manduca sexta (tobacco hornworm) ]

    Gene ID: 115442845, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC115442845
    Gene description
    uncharacterized LOC115442845
    Locus tag
    O3G_MSEX005856
    See related
    EnsemblRapid:ENSMSXG00000020570
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Manduca sexta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
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    Genomic context

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    See LOC115442845 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current JHU_Msex_v1.0 (GCF_014839805.1) 18 NC_051132.1 (4358161..4362711)
    100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942066.1 (464372..468784)

    Chromosome 18 - NC_051132.1Genomic Context describing neighboring genes Neighboring gene protein BCCIP homolog Neighboring gene protein polybromo-1 Neighboring gene uncharacterized LOC115442849 Neighboring gene uncharacterized LOC115442847 Neighboring gene transcription factor LBX1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC115442845

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference JHU_Msex_v1.0 Primary Assembly

    Genomic

    1. NC_051132.1 Reference JHU_Msex_v1.0 Primary Assembly

      Range
      4358161..4362711
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030168035.2 → XP_030023895.1  uncharacterized protein LOC115442845 isoform X3

      UniProtKB/TrEMBL
      A0A921Z075, A0A921Z0G6
      Related
      ENSMSXP00000029573.1, ENSMSXT00000033956.1

    2. XM_030168031.2 → XP_030023891.1  uncharacterized protein LOC115442845 isoform X3

      UniProtKB/TrEMBL
      A0A921Z075, A0A921Z0G6
      Related
      ENSMSXP00000029570.1, ENSMSXT00000033953.1

    3. XM_030168037.2 → XP_030023897.2  uncharacterized protein LOC115442845 isoform X1

      UniProtKB/TrEMBL
      A0A921Z0G6
      Related
      ENSMSXP00000029554.1, ENSMSXT00000033933.1

    4. XM_030168036.2 → XP_030023896.1  uncharacterized protein LOC115442845 isoform X3

      UniProtKB/TrEMBL
      A0A921Z075, A0A921Z0G6

    5. XM_030168034.2 → XP_030023894.1  uncharacterized protein LOC115442845 isoform X3

      UniProtKB/TrEMBL
      A0A921Z075, A0A921Z0G6

    6. XM_030168030.2 → XP_030023890.1  uncharacterized protein LOC115442845 isoform X2

      UniProtKB/TrEMBL
      A0A921Z0G6

    7. XM_030168032.2 → XP_030023892.1  uncharacterized protein LOC115442845 isoform X3

      UniProtKB/TrEMBL
      A0A921Z075, A0A921Z0G6

    8. XM_030168033.2 → XP_030023893.1  uncharacterized protein LOC115442845 isoform X3

      UniProtKB/TrEMBL
      A0A921Z075, A0A921Z0G6
      Related
      ENSMSXP00000029557.1, ENSMSXT00000033937.1

    9. XM_030168038.2 → XP_030023898.1  uncharacterized protein LOC115442845 isoform X4

      UniProtKB/TrEMBL
      A0A921Z043
    Nucleotide Protein
    Heading Accession and Version

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