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    MAFA MAF bZIP transcription factor A [ Microcaecilia unicolor ]

    Gene ID: 115480867, updated on 17-Mar-2024

    Summary

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    Gene symbol
    MAFA
    Gene description
    MAF bZIP transcription factor A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microcaecilia unicolor
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
    Orthologs
    human mouse all
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    Genomic context

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    See MAFA in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current aMicUni1.1 (GCF_901765095.1) 1 NC_044031.1 (614908273..614911024, complement)

    Chromosome 1 - NC_044031.1Genomic Context describing neighboring genes Neighboring gene cilia- and flagella-associated protein 251-like Neighboring gene DNA topoisomerase I mitochondrial Neighboring gene rhophilin Rho GTPase binding protein 1 Neighboring gene zinc finger CCCH-type containing 3 Neighboring gene 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044031.1 Chromosome 1 Reference aMicUni1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retinal rod cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor MafA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aMicUni1.1 Primary Assembly

    Genomic

    1. NC_044031.1 Reference aMicUni1.1 Primary Assembly

      Range
      614908273..614911024 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030219831.1 → XP_030075691.1  transcription factor MafA

      UniProtKB/TrEMBL
      A0A6P7ZHJ7
      Conserved Domains (2) summary
      cd14718
      Location:219 → 288
      bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
      pfam08383
      Location:102 → 135
      Maf_N; Maf N-terminal region
    Nucleotide Protein
    Heading Accession and Version

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