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    carm1 coactivator-associated arginine methyltransferase 1 [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115534026, updated on 17-Mar-2024

    Summary

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    Gene symbol
    carm1
    Gene description
    coactivator-associated arginine methyltransferase 1
    See related
    Ensembl:ENSGMOG00000009257
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
    human zebrafish all
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    Genomic context

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    See carm1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 2 NC_044049.1 (27871317..27884961)

    Chromosome 2 - NC_044049.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene 4-aminobutyrate aminotransferase Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene Yip1 domain family, member 2 Neighboring gene translocase of inner mitochondrial membrane 29 Neighboring gene solute carrier family 25 member 23b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044049.1 Chromosome 2 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-arginine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-arginine methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-arginine methyltransferase CARM1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044049.1 Reference gadMor3.0 Primary Assembly

      Range
      27871317..27884961
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030344612.1 → XP_030200472.1  histone-arginine methyltransferase CARM1 isoform X2

      UniProtKB/TrEMBL
      A0A8C5CLL6
      Related
      ENSGMOP00000053559.1, ENSGMOT00000066683.1
      Conserved Domains (2) summary
      cd02440
      Location:162 → 263
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
      pfam11531
      Location:8 → 112
      CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

    2. XM_030344604.1 → XP_030200464.1  histone-arginine methyltransferase CARM1 isoform X1

      UniProtKB/TrEMBL
      A0A8C5CLL6
      Related
      ENSGMOP00000052766.1, ENSGMOT00000026277.1
      Conserved Domains (2) summary
      cd02440
      Location:162 → 263
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
      pfam11531
      Location:8 → 112
      CARM1; Coactivator-associated arginine methyltransferase 1 N terminal
    Nucleotide Protein
    Heading Accession and Version

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