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    asb1 ankyrin repeat and SOCS box containing 1 [ Archocentrus centrarchus (flier cichlid) ]

    Gene ID: 115801213, updated on 17-Mar-2024

    Summary

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    Gene symbol
    asb1
    Gene description
    ankyrin repeat and SOCS box containing 1
    See related
    EnsemblRapid:ENSACEG00005014909
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Archocentrus centrarchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; New World cichlids; Cichlasomatinae; Heroini; Archocentrus
    Orthologs
    human zebrafish all
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    Genomic context

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    See asb1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current fArcCen1 (GCF_007364275.1) 21 NC_044366.1 (7871760..7881694, complement)

    Chromosome 21 - NC_044366.1Genomic Context describing neighboring genes Neighboring gene histone deacetylase 4 Neighboring gene twist2 Neighboring gene TNF receptor-associated factor 3 interacting protein 1 Neighboring gene anterior gradient 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044366.1 Chromosome 21 Reference fArcCen1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and SOCS box protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Archocentrus centrarchus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fArcCen1

    Genomic

    1. NC_044366.1 Reference fArcCen1

      Range
      7871760..7881694 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030758970.1 → XP_030614830.1  ankyrin repeat and SOCS box protein 1 isoform X1

      Related
      ENSACEP00005033508.1, ENSACET00005034739.1
      Conserved Domains (5) summary
      PHA03095
      Location:109 → 278
      PHA03095; ankyrin-like protein; Provisional
      cd03716
      Location:308 → 349
      SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
      sd00045
      Location:94 → 123
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:97 → 187
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:56 → 123
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_030758971.1 → XP_030614831.1  ankyrin repeat and SOCS box protein 1 isoform X2

      Related
      ENSACEP00005033502.1, ENSACET00005034733.1
      Conserved Domains (4) summary
      PHA03095
      Location:109 → 278
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:94 → 123
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:97 → 187
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:56 → 123
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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