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    ASIP agouti signaling protein [ Trachypithecus francoisi (Francois's langur) ]

    Gene ID: 117068670, updated on 19-Mar-2024

    Summary

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    Gene symbol
    ASIP
    Gene description
    agouti signaling protein
    See related
    EnsemblRapid:ENSTFRG00000024760
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trachypithecus francoisi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
    Also known as
    ASP
    Orthologs
    human mouse all
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    Genomic context

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    See ASIP in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022681467.1 (29711681..29765794)

    NW_022681467.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S2-like Neighboring gene eukaryotic translation initiation factor 2 subunit beta Neighboring gene actin-related protein 2/3 complex subunit 5-like Neighboring gene adenosylhomocysteinase Neighboring gene itchy E3 ubiquitin protein ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022681467 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables melanocortin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables neuropeptide hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in melanosome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of melanin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    agouti-signaling protein
    Names
    Agouti switch protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tfra_2.0 Primary Assembly

    Genomic

    1. NW_022681467.1 Reference Tfra_2.0 Primary Assembly

      Range
      29711681..29765794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033186148.1 → XP_033042039.1  agouti-signaling protein isoform X1

      Conserved Domains (1) summary
      smart00792
      Location:43 → 155
      Agouti; Agouti protein

    2. XM_033186149.1 → XP_033042040.1  agouti-signaling protein isoform X2

      UniProtKB/Swiss-Prot
      A1YL74
      Related
      ENSTFRP00000028783.1, ENSTFRT00000036303.1
      Conserved Domains (1) summary
      smart00792
      Location:16 → 128
      Agouti; Agouti protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1YL74.1 GenPept UniProtKB/Swiss-Prot:A1YL74

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