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    LOC117525427 protein mono-ADP-ribosyltransferase PARP14-like [ Thalassophryne amazonica ]

    Gene ID: 117525427, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC117525427
    Gene description
    protein mono-ADP-ribosyltransferase PARP14-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Thalassophryne amazonica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Batrachoidaria; Batrachoididae; Thalassophryne
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    Genomic context

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    See LOC117525427 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current fThaAma1.1 (GCF_902500255.1) 14 NC_047116.1 (53292460..53331031, complement)

    Chromosome 14 - NC_047116.1Genomic Context describing neighboring genes Neighboring gene C-X-C chemokine receptor type 1-like Neighboring gene striated muscle preferentially expressed protein kinase-like Neighboring gene extended synaptotagmin-like protein 3 Neighboring gene poly(ADP-ribose) polymerase family member 9 Neighboring gene Fas apoptotic inhibitory molecule a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047116.1 Chromosome 14 Reference fThaAma1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein mono-ADP-ribosyltransferase PARP14-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Thalassophryne amazonica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fThaAma1.1

    Genomic

    1. NC_047116.1 Reference fThaAma1.1

      Range
      53292460..53331031 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034187286.1 → XP_034043177.1  protein mono-ADP-ribosyltransferase PARP14-like isoform X2

      Conserved Domains (4) summary
      cd01439
      Location:1491 → 1610
      TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
      cd02903
      Location:1018 → 1187
      Macro_BAL-like; macrodomain, B-aggressive lymphoma (BAL)-like family
      cl00019
      Location:818 → 992
      Macro_SF; macrodomain superfamily
      cl17169
      Location:6 → 83
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_034187285.1 → XP_034043176.1  protein mono-ADP-ribosyltransferase PARP14-like isoform X1

      Conserved Domains (4) summary
      cd01439
      Location:1491 → 1610
      TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
      cd02903
      Location:1018 → 1187
      Macro_BAL-like; macrodomain, B-aggressive lymphoma (BAL)-like family
      cl00019
      Location:818 → 992
      Macro_SF; macrodomain superfamily
      cl17169
      Location:6 → 83
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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