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    LOC117654001 DNA primase large subunit-like [ Thrips palmi ]

    Gene ID: 117654001, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC117654001
    Gene description
    DNA primase large subunit-like
    See related
    EnsemblRapid:LOC117654001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Thrips palmi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Thysanoptera; Terebrantia; Thripoidea; Thripidae; Thrips
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    Genomic context

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    See LOC117654001 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current TpBJ-2018v1 (GCF_012932325.1) Unplaced Scaffold NW_023144635.1 (2978770..2980515)

    NW_023144635.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase BRSK2-like Neighboring gene ribosomal RNA small subunit methyltransferase NEP1 Neighboring gene magnesium-dependent phosphatase 1-like Neighboring gene alpha-tubulin N-acetyltransferase-like Neighboring gene phospholipid phosphatase 6-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023144635 Unplaced Scaffold Reference TpBJ-2018v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA replication, synthesis of primer IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of alpha DNA polymerase:primase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA primase large subunit-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Thrips palmi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TpBJ-2018v1 Primary Assembly

    Genomic

    1. NW_023144635.1 Reference TpBJ-2018v1 Primary Assembly

      Range
      2978770..2980515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034400123.1 → XP_034256014.1  DNA primase large subunit-like isoform X1

      UniProtKB/TrEMBL
      A0A6P9AFA4
      Related
      XP_034256014.1, XM_034400123.1
      Conserved Domains (1) summary
      cl11970
      Location:3 → 376
      PriL; Archaeal/eukaryotic core primase: Large subunit, PriL

    2. XM_034400124.1 → XP_034256015.1  DNA primase large subunit-like isoform X2

      UniProtKB/TrEMBL
      A0A6P9AEW4
      Related
      XP_034256015.1, XM_034400124.1
      Conserved Domains (1) summary
      cl11970
      Location:3 → 357
      PriL; Archaeal/eukaryotic core primase: Large subunit, PriL
    Nucleotide Protein
    Heading Accession and Version

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