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    LOC117910633 potassium channel AKT2/3-like [ Vitis riparia (riverbank grape) ]

    Gene ID: 117910633, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC117910633
    Gene description
    potassium channel AKT2/3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis riparia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC117910633 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) Unplaced Scaffold NW_023269787.1 (26394..33161)

    NW_023269787.1Genomic Context describing neighboring genes Neighboring gene UDP-glucose:glycoprotein glucosyltransferase-like Neighboring gene putative disease resistance RPP13-like protein 1 Neighboring gene putative disease resistance RPP13-like protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023269787 Unplaced Scaffold Reference EGFV_Vit.rip_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    potassium channel AKT2/3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EGFV_Vit.rip_1.0 Primary Assembly

    Genomic

    1. NW_023269787.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

      Range
      26394..33161
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034824739.1 → XP_034680630.1  potassium channel AKT2/3-like isoform X2

      Conserved Domains (2) summary
      PLN03192
      Location:20 → 811
      PLN03192; Voltage-dependent potassium channel; Provisional
      sd00045
      Location:577 → 607
      ANK; ANK repeat [structural motif]

    2. XM_034824738.1 → XP_034680629.1  potassium channel AKT2/3-like isoform X1

      Conserved Domains (2) summary
      PLN03192
      Location:20 → 841
      PLN03192; Voltage-dependent potassium channel; Provisional
      sd00045
      Location:577 → 607
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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