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    LOC118221635 histone-arginine methyltransferase CARM1 [ Anguilla anguilla (European eel) ]

    Gene ID: 118221635, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC118221635
    Gene description
    histone-arginine methyltransferase CARM1
    See related
    EnsemblRapid:ENSAANG00010006739
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anguilla anguilla
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
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    Genomic context

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    See LOC118221635 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current fAngAng1.pri (GCF_013347855.1) 2 NC_049202.1 (63188761..63208183, complement)

    Chromosome 2 - NC_049202.1Genomic Context describing neighboring genes Neighboring gene afadin- and alpha-actinin-binding protein Neighboring gene protein YIPF2-like Neighboring gene uncharacterized LOC118221638 Neighboring gene uncharacterized LOC118219732 Neighboring gene dispanin subfamily A member 2b-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_049202.1 Chromosome 2 Reference fAngAng1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-arginine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-arginine methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-arginine methyltransferase CARM1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Anguilla anguilla Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAngAng1.pri Primary Assembly

    Genomic

    1. NC_049202.1 Reference fAngAng1.pri Primary Assembly

      Range
      63188761..63208183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035406873.1 → XP_035262764.1  histone-arginine methyltransferase CARM1 isoform X3

      UniProtKB/TrEMBL
      A0A9D3S8Q3
      Conserved Domains (2) summary
      cd02440
      Location:189 → 290
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
      pfam11531
      Location:36 → 139
      CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

    2. XM_035406872.1 → XP_035262763.1  histone-arginine methyltransferase CARM1 isoform X2

      UniProtKB/TrEMBL
      A0A9D3S8Q3
      Related
      ENSAANP00010018184.1, ENSAANT00010019047.1
      Conserved Domains (2) summary
      cd02440
      Location:190 → 291
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
      pfam11531
      Location:36 → 140
      CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

    3. XM_035406871.1 → XP_035262762.1  histone-arginine methyltransferase CARM1 isoform X1

      UniProtKB/TrEMBL
      A0A9D3S8Q3
      Related
      ENSAANP00010018290.1, ENSAANT00010019154.1
      Conserved Domains (2) summary
      cd02440
      Location:190 → 291
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
      pfam11531
      Location:36 → 140
      CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

    4. XM_035406874.1 → XP_035262765.1  histone-arginine methyltransferase CARM1 isoform X4

      UniProtKB/TrEMBL
      A0A9D3S8Q3
      Conserved Domains (2) summary
      cd02440
      Location:126 → 227
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
      cl17171
      Location:13 → 76
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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