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    LOC118385596 calcium/calmodulin-dependent protein kinase type II subunit beta-like [ Oncorhynchus keta (chum salmon) ]

    Gene ID: 118385596, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC118385596
    Gene description
    calcium/calmodulin-dependent protein kinase type II subunit beta-like
    See related
    EnsemblRapid:ENSOKEG00005000136
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus keta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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    Genomic context

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    See LOC118385596 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2023_03 current Oket_V2 (GCF_023373465.1) 6 NC_068426.1 (41126859..41189292, complement)

    Chromosome 6 - NC_068426.1Genomic Context describing neighboring genes Neighboring gene zinc finger MIZ domain-containing protein 2-like Neighboring gene uncharacterized LOC127930799 Neighboring gene 2-oxoglutarate dehydrogenase complex component E1-like Neighboring gene uncharacterized LOC127930801 Neighboring gene uncharacterized LOC127930802 Neighboring gene endothelin-converting enzyme 2-like Neighboring gene 28S ribosomal protein S24, mitochondrial-like Neighboring gene uncharacterized LOC118385700

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_068426.1 Chromosome 6 Reference Oket_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium/calmodulin-dependent protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium/calmodulin-dependent protein kinase type II subunit beta-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Oket_V2 Primary Assembly

    Genomic

    1. NC_068426.1 Reference Oket_V2 Primary Assembly

      Range
      41126859..41189292 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052521571.1 → XP_052377531.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X11

      Related
      ENSOKEP00005000224.1, ENSOKET00005000294.1

    2. XM_052521568.1 → XP_052377528.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X9

    3. XM_052521563.1 → XP_052377523.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X4

    4. XM_052521570.1 → XP_052377530.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X10

      Related
      ENSOKEP00005000227.1, ENSOKET00005000297.1

    5. XM_052521567.1 → XP_052377527.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X8

      Related
      ENSOKEP00005000230.1, ENSOKET00005000300.1

    6. XM_052521564.1 → XP_052377524.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X5

    7. XM_052521562.1 → XP_052377522.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X3

    8. XM_052521565.1 → XP_052377525.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X6

      Related
      ENSOKEP00005000225.1, ENSOKET00005000295.1

    9. XM_052521561.1 → XP_052377521.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X2

    10. XM_052521566.1 → XP_052377526.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X7

      Related
      ENSOKEP00005000221.1, ENSOKET00005000291.1

    11. XM_052521560.1 → XP_052377520.1  calcium/calmodulin-dependent protein kinase type II subunit beta-like isoform X1

      Related
      ENSOKEP00005000228.1, ENSOKET00005000298.1
    Nucleotide Protein Strain
    Heading Accession and Version

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