U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    snrpd1 small nuclear ribonucleoprotein D1 polypeptide [ Acanthopagrus latus (yellowfin seabream) ]

    Gene ID: 119016636, updated on 21-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    snrpd1
    Gene description
    small nuclear ribonucleoprotein D1 polypeptide
    See related
    EnsemblRapid:ENSALTG00010007078
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acanthopagrus latus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See snrpd1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current fAcaLat1.1 (GCF_904848185.1) 3 NC_051041.1 (12654122..12658469)

    Chromosome 3 - NC_051041.1Genomic Context describing neighboring genes Neighboring gene receptor-transporting protein 3-like Neighboring gene ankyrin repeat and IBR domain-containing protein 1-like Neighboring gene gamma-glutamylcyclotransferase a Neighboring gene ADNP homeobox 2b Neighboring gene uncharacterized LOC119016637

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_051041.1 Chromosome 3 Reference fAcaLat1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SMN-Sm protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U12-type spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U4 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U5 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of commitment complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of pICln-Sm protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    small nuclear ribonucleoprotein Sm D1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAcaLat1.1 Primary Assembly

    Genomic

    1. NC_051041.1 Reference fAcaLat1.1 Primary Assembly

      Range
      12654122..12658469
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037092671.1 → XP_036948566.1  small nuclear ribonucleoprotein Sm D1

      Related
      ENSALTP00010016714.1, ENSALTT00010019209.1
      Conserved Domains (1) summary
      cd01724
      Location:2 → 93
      Sm_D1; Sm protein D1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.