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    RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase [ Choloepus didactylus (southern two-toed sloth) ]

    Gene ID: 119509098, updated on 21-Mar-2024

    Summary

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    Gene symbol
    RNF19A
    Gene description
    ring finger protein 19A, RBR E3 ubiquitin protein ligase
    See related
    EnsemblRapid:ENSCDIG00005015047
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Choloepus didactylus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Pilosa; Folivora; Megalonychidae; Choloepus
    Orthologs
    human mouse all
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    Genomic context

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    See RNF19A in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current mChoDid1.pri (GCF_015220235.1) 14 NC_051320.1 (56029352..56186967, complement)

    Chromosome 14 - NC_051320.1Genomic Context describing neighboring genes Neighboring gene ubiA prenyltransferase domain-containing protein 1-like Neighboring gene F-box protein 43 Neighboring gene RNA polymerase II, I and III subunit K Neighboring gene sperm associated antigen 1 Neighboring gene uncharacterized LOC119509101 Neighboring gene farnesyl pyrophosphate synthase-like Neighboring gene U6 spliceosomal RNA Neighboring gene ankyrin repeat domain 46

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051320.1 Chromosome 14 Reference mChoDid1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF19A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Choloepus didactylus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mChoDid1.pri Primary Assembly

    Genomic

    1. NC_051320.1 Reference mChoDid1.pri Primary Assembly

      Range
      56029352..56186967 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037802955.1 → XP_037658883.1  E3 ubiquitin-protein ligase RNF19A isoform X2

      Related
      ENSCDIP00005021021.1, ENSCDIT00005023791.1
      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    2. XM_037802956.1 → XP_037658884.1  E3 ubiquitin-protein ligase RNF19A isoform X3

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    3. XM_037802954.1 → XP_037658882.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    4. XM_037802957.1 → XP_037658885.1  E3 ubiquitin-protein ligase RNF19A isoform X4

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    5. XM_037802948.1 → XP_037658876.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    6. XM_037802952.1 → XP_037658880.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Related
      ENSCDIP00005021088.1, ENSCDIT00005023863.1
      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    7. XM_037802951.1 → XP_037658879.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    8. XM_037802950.1 → XP_037658878.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    9. XM_037802953.1 → XP_037658881.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein

    10. XM_037802949.1 → XP_037658877.1  E3 ubiquitin-protein ligase RNF19A isoform X1

      Conserved Domains (4) summary
      smart00647
      Location:199 → 264
      IBR; In Between Ring fingers
      cd16775
      Location:131 → 185
      RING-HC_RBR_RNF19A; RING finger, HC subclass, found in RING finger protein 19A (RNF19A) and similar proteins
      pfam01485
      Location:297 → 335
      IBR; IBR domain, a half RING-finger domain
      cl00570
      Location:361 → 450
      AzlC; AzlC protein
    Nucleotide Protein
    Heading Accession and Version

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