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    LOC119650902 RUN and FYVE domain-containing protein 2 [ Hermetia illucens (black soldier fly) ]

    Gene ID: 119650902, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC119650902
    Gene description
    RUN and FYVE domain-containing protein 2
    Locus tag
    HERILL_LOCUS6971
    See related
    EnsemblRapid:LOC119650902
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hermetia illucens
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Stratiomyomorpha; Stratiomyidae; Hermetiinae; Hermetia
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC119650902 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current iHerIll2.2.curated.20191125 (GCF_905115235.1) 3 NC_051851.1 (24080135..24145890)

    Chromosome 3 - NC_051851.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119650940 Neighboring gene Zinc transporter Zip99C Neighboring gene pinin Neighboring gene alpha-Mannosidase class I b Neighboring gene BRD4 interacting chromatin remodeling complex associated protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051851.1 Chromosome 3 Reference iHerIll2.2.curated.20191125 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RUN and FYVE domain-containing protein 2; protein RUFY3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Hermetia illucens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference iHerIll2.2.curated.20191125 Primary Assembly

    Genomic

    1. NC_051851.1 Reference iHerIll2.2.curated.20191125 Primary Assembly

      Range
      24080135..24145890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038054087.1 → XP_037910015.1  RUN and FYVE domain-containing protein 2 isoform X4

      Related
      XP_037910015.1, XM_038054087.1
      Conserved Domains (4) summary
      COG1196
      Location:375 → 589
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:272 → 467
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:599 → 666
      FYVE; FYVE zinc finger
      pfam02759
      Location:111 → 232
      RUN; RUN domain

    2. XM_038054088.1 → XP_037910016.1  protein RUFY3 isoform X5

      Related
      XP_037910016.1, XM_038054088.1
      Conserved Domains (2) summary
      TIGR02168
      Location:331 → 553
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:168 → 289
      RUN; RUN domain

    3. XM_038054084.1 → XP_037910012.1  RUN and FYVE domain-containing protein 2 isoform X1

      Related
      XP_037910012.1, XM_038054084.1
      Conserved Domains (4) summary
      COG1196
      Location:432 → 646
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:329 → 524
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:656 → 723
      FYVE; FYVE zinc finger
      pfam02759
      Location:168 → 289
      RUN; RUN domain

    4. XM_038054083.1 → XP_037910011.1  RUN and FYVE domain-containing protein 2 isoform X1

      Related
      XP_037910011.1, XM_038054083.1
      Conserved Domains (4) summary
      COG1196
      Location:432 → 646
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:329 → 524
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:656 → 723
      FYVE; FYVE zinc finger
      pfam02759
      Location:168 → 289
      RUN; RUN domain

    5. XM_038054086.1 → XP_037910014.1  RUN and FYVE domain-containing protein 2 isoform X3

      Related
      XP_037910014.1, XM_038054086.1
      Conserved Domains (4) summary
      COG1196
      Location:393 → 607
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:290 → 485
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:617 → 684
      FYVE; FYVE zinc finger
      pfam02759
      Location:129 → 250
      RUN; RUN domain

    6. XM_038054089.1 → XP_037910017.1  protein RUFY3 isoform X6

      Related
      XP_037910017.1, XM_038054089.1
      Conserved Domains (2) summary
      COG1196
      Location:339 → 526
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:168 → 289
      RUN; RUN domain

    7. XM_038054085.1 → XP_037910013.1  RUN and FYVE domain-containing protein 2 isoform X2

      Related
      XP_037910013.1, XM_038054085.1
      Conserved Domains (4) summary
      COG1196
      Location:405 → 619
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:302 → 497
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam01363
      Location:629 → 696
      FYVE; FYVE zinc finger
      pfam02759
      Location:141 → 262
      RUN; RUN domain
    Nucleotide Protein
    Heading Accession and Version

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