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    OGG1 8-oxoguanine DNA glycosylase [ Tachyglossus aculeatus (Australian echidna) ]

    Gene ID: 119950541, updated on 21-Mar-2024

    Summary

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    Gene symbol
    OGG1
    Gene description
    8-oxoguanine DNA glycosylase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tachyglossus aculeatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus
    Orthologs
    human mouse all
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    Genomic context

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    See OGG1 in Genome Data Viewer
    Location:
    chromosome: X1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current mTacAcu1.pri (GCF_015852505.1) X1 NC_052101.1 (96635017..96640722, complement)

    Chromosome X1 - NC_052101.1Genomic Context describing neighboring genes Neighboring gene RNA pseudouridine synthase D3 Neighboring gene actin related protein 2/3 complex subunit 4 Neighboring gene transcriptional adaptor 3 Neighboring gene calcium/calmodulin dependent protein kinase I Neighboring gene bromodomain and PHD finger containing 1 Neighboring gene uncharacterized LOC119919606

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052101.1 Chromosome X1 Reference mTacAcu1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables damaged DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in base-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in base-excision repair, AP site formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    N-glycosylase/DNA lyase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tachyglossus aculeatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mTacAcu1.pri

    Genomic

    1. NC_052101.1 Reference mTacAcu1.pri

      Range
      96635017..96640722 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038773040.1 → XP_038628968.1  N-glycosylase/DNA lyase

      Conserved Domains (1) summary
      TIGR00588
      Location:1 → 314
      ogg; 8-oxoguanine DNA-glycosylase (ogg)
    Nucleotide Protein
    Heading Accession and Version

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