U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC120023830 C-C chemokine receptor type 6-like [ Salvelinus namaycush (lake trout) ]

    Gene ID: 120023830, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC120023830
    Gene description
    C-C chemokine receptor type 6-like
    See related
    EnsemblRapid:ENSSNMG00000015515
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvelinus namaycush
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC120023830 in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current SaNama_1.0 (GCF_016432855.1) 28 NC_052334.1 (33120589..33121978, complement)

    Chromosome 28 - NC_052334.1Genomic Context describing neighboring genes Neighboring gene myelin transcription factor 1-like protein Neighboring gene peroxidasin-like Neighboring gene uncharacterized LOC120023793 Neighboring gene uncharacterized LOC120023795 Neighboring gene reticulon 4 interacting protein 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_052334.1 Chromosome 28 Reference SaNama_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemokine receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    C-C chemokine receptor type 6-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SaNama_1.0 Primary Assembly

    Genomic

    1. NC_052334.1 Reference SaNama_1.0 Primary Assembly

      Range
      33120589..33121978 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038967947.1 → XP_038823875.1  C-C chemokine receptor type 6-like

      UniProtKB/TrEMBL
      A0A8U0PF84
      Related
      ENSSNMP00000019746.1, ENSSNMT00000023215.1
      Conserved Domains (2) summary
      cd14964
      Location:50 → 72
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:50 → 328
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases