U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC120114833 4-coumarate--CoA ligase-like 9 [ Hibiscus syriacus ]

    Gene ID: 120114833, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC120114833
    Gene description
    4-coumarate--CoA ligase-like 9
    Locus tag
    F3Y22_tig00000003pilonHSYRG00171
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hibiscus syriacus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Hibiscus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC120114833 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current ASM638163v2 (GCF_006381635.1) Unplaced Scaffold NW_024061753.1 (1957311..1967952, complement)

    NW_024061753.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120218476 Neighboring gene 4-coumarate--CoA ligase-like 5 Neighboring gene uncharacterized LOC120115025 Neighboring gene 4-coumarate--CoA ligase-like 9 Neighboring gene 4-coumarate--CoA ligase-like 9

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_024061753 Unplaced Scaffold Reference ASM638163v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CoA-ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    4-coumarate--CoA ligase-like 9
    Names
    4-coumarate--CoA ligase-like 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Hibiscus syriacus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM638163v2 Primary Assembly

    Genomic

    1. NW_024061753.1 Reference ASM638163v2 Primary Assembly

      Range
      1957311..1967952 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039135646.1 → XP_038991577.1  4-coumarate--CoA ligase-like 9

      Conserved Domains (1) summary
      cd05904
      Location:24 → 534
      4CL; 4-Coumarate-CoA Ligase (4CL)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases