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    EMILIN3 elastin microfibril interfacer 3 [ Mauremys reevesii (Reeves's turtle) ]

    Gene ID: 120381333, updated on 21-Mar-2024

    Summary

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    Gene symbol
    EMILIN3
    Gene description
    elastin microfibril interfacer 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys reevesii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
    Orthologs
    human mouse all
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    Genomic context

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    See EMILIN3 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    5
    Annotation release Status Assembly LG Location
    100 current ASM1616193v1 (GCF_016161935.1) 13 NC_052635.1 (29560489..29577472, complement)

    Linkage Group 13 - NC_052635.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120380221 Neighboring gene zinc fingers and homeoboxes 3 Neighboring gene lipin 3 Neighboring gene uncharacterized LOC120381334 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene ribophorin II

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052635.1 Chromosome 13 Reference ASM1616193v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    EMILIN-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1616193v1 Primary Assembly

    Genomic

    1. NC_052635.1 Reference ASM1616193v1 Primary Assembly

      Range
      29560489..29577472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039499546.1 → XP_039355480.1  EMILIN-3 isoform X1

      Conserved Domains (2) summary
      pfam15921
      Location:277 → 810
      CCDC158; Coiled-coil domain-containing protein 158
      pfam07546
      Location:68 → 132
      EMI; EMI domain

    2. XM_039499547.1 → XP_039355481.1  EMILIN-3 isoform X2

      Conserved Domains (2) summary
      pfam15921
      Location:231 → 758
      CCDC158; Coiled-coil domain-containing protein 158
      pfam07546
      Location:16 → 80
      EMI; EMI domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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