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    NR2E3 nuclear receptor subfamily 2 group E member 3 [ Rana temporaria (common frog) ]

    Gene ID: 120931516, updated on 21-Mar-2024

    Summary

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    Gene symbol
    NR2E3
    Gene description
    nuclear receptor subfamily 2 group E member 3
    See related
    EnsemblRapid:ENSRTEG00010026356
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rana temporaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
    Orthologs
    human mouse all
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    Genomic context

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    See NR2E3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current aRanTem1.1 (GCF_905171775.1) 3 NC_053491.1 (97447817..97459170, complement)

    Chromosome 3 - NC_053491.1Genomic Context describing neighboring genes Neighboring gene SUMO peptidase family member, NEDD8 specific Neighboring gene myosin IXA Neighboring gene uncharacterized LOC120931518 Neighboring gene vacuolar protein sorting 13 homolog C Neighboring gene C2 calcium-dependent domain-containing protein 4C-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053491.1 Chromosome 3 Reference aRanTem1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear steroid receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    photoreceptor-specific nuclear receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aRanTem1.1

    Genomic

    1. NC_053491.1 Reference aRanTem1.1

      Range
      97447817..97459170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040343050.1 → XP_040198984.1  photoreceptor-specific nuclear receptor

      Related
      ENSRTEP00010032075.1, ENSRTET00010043834.1
      Conserved Domains (2) summary
      cd06950
      Location:188 → 393
      NR_LBD_Tlx_PNR_like; The ligand binding domain of Tailless-like proteins, orphan nuclear receptors
      cd06970
      Location:26 → 117
      NR_DBD_PNR; DNA-binding domain of the photoreceptor cell-specific nuclear receptor (PNR) is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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