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    CDYL chromodomain Y like [ Lagopus leucura (white-tailed ptarmigan) ]

    Gene ID: 122179231, updated on 22-Mar-2024

    Summary

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    Gene symbol
    CDYL
    Gene description
    chromodomain Y like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lagopus leucura
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
    Orthologs
    human mouse all
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    Genomic context

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    See CDYL in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current USGS_WTPT01 (GCF_019238085.1) Unplaced Scaffold NW_024962263.1 (10421423..10527327, complement)

    NW_024962263.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 3G Neighboring gene ribonuclease P/MRP subunit p40 Neighboring gene uncharacterized LOC122179274 Neighboring gene enoyl-CoA delta isomerase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024962263 Unplaced Scaffold Reference USGS_WTPT01

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: chromodomain Y-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lagopus leucura Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USGS_WTPT01

    Genomic

    1. NW_024962263.1 Reference USGS_WTPT01

      Range
      10421423..10527327 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042869983.1 → XP_042725917.1  LOW QUALITY PROTEIN: chromodomain Y-like protein

      Conserved Domains (2) summary
      cd06558
      Location:619 → 815
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
      cd18634
      Location:335 → 386
      CD_CDY; chromodomain of the Chromodomain Y-like protein family
    Nucleotide Protein
    Heading Accession and Version

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