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    LOC122295207 uncharacterized LOC122295207 [ Carya illinoinensis ]

    Gene ID: 122295207, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC122295207
    Gene description
    uncharacterized LOC122295207
    Locus tag
    CIPAW_14G032100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carya illinoinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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    Genomic context

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    See LOC122295207 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 14 NC_056765.1 (4639385..4648960)

    Chromosome 14 - NC_056765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122293424 Neighboring gene CBL-interacting serine/threonine-protein kinase 7-like Neighboring gene uncharacterized LOC122294672 Neighboring gene small nucleolar RNA R71

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056765.1 Chromosome 14 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA-Seq Analysis of Developing Pecan (Carya illinoinensis) Embryos Reveals Parallel Expression Patterns among Allergen and Lipid Metabolism Genes. Mattison CP, et al. J Agric Food Chem, 2017 Feb 22. PMID 28121438

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC122295207

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.illinoinensisPawnee_v1 Primary Assembly

    Genomic

    1. NC_056765.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

      Range
      4639385..4648960
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043104324.1 → XP_042960258.1  uncharacterized protein LOC122295207 isoform X1

      UniProtKB/TrEMBL
      A0A922AIU6, A0A922D3J3
      Conserved Domains (2) summary
      COG0666
      Location:18 → 123
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:28 → 58
      ANK; ANK repeat [structural motif]

    2. XM_043104325.1 → XP_042960259.1  uncharacterized protein LOC122295207 isoform X2

      UniProtKB/TrEMBL
      A0A922D3J3
      Conserved Domains (2) summary
      COG0666
      Location:18 → 123
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:28 → 58
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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