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    LOC122299943 uncharacterized LOC122299943 [ Carya illinoinensis ]

    Gene ID: 122299943, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC122299943
    Gene description
    uncharacterized LOC122299943
    Locus tag
    CIPAW_16G118600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carya illinoinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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    Genomic context

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    See LOC122299943 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 16 NC_056767.1 (30406920..30413665)

    Chromosome 16 - NC_056767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized methyltransferase At2g41040, chloroplastic-like Neighboring gene protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like Neighboring gene uncharacterized LOC122299527 Neighboring gene probable manganese-transporting ATPase PDR2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056767.1 Chromosome 16 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA-Seq Analysis of Developing Pecan (Carya illinoinensis) Embryos Reveals Parallel Expression Patterns among Allergen and Lipid Metabolism Genes. Mattison CP, et al. J Agric Food Chem, 2017 Feb 22. PMID 28121438
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasmodesma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC122299943

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.illinoinensisPawnee_v1 Primary Assembly

    Genomic

    1. NC_056767.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

      Range
      30406920..30413665
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043110429.1 → XP_042966363.1  uncharacterized protein LOC122299943

      UniProtKB/TrEMBL
      A0A922D5B3
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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