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    LOC122312010 probable LRR receptor-like serine/threonine-protein kinase At3g47570 [ Carya illinoinensis ]

    Gene ID: 122312010, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC122312010
    Gene description
    probable LRR receptor-like serine/threonine-protein kinase At3g47570
    Locus tag
    CIPAW_05G135900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carya illinoinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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    Genomic context

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    See LOC122312010 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 5 NC_056756.1 (16344428..16347348, complement)

    Chromosome 5 - NC_056756.1Genomic Context describing neighboring genes Neighboring gene protein FEZ-like Neighboring gene uncharacterized LOC122311687 Neighboring gene putative receptor-like protein kinase At3g47110 Neighboring gene uncharacterized LOC122312012

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056756.1 Chromosome 5 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptomic Analysis Provides Insights into Grafting Union Development in Pecan (Carya illinoinensis). Mo Z, et al. Genes (Basel), 2018 Feb 5. PMID 29401757, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable LRR receptor-like serine/threonine-protein kinase At3g47570

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.illinoinensisPawnee_v1 Primary Assembly

    Genomic

    1. NC_056756.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

      Range
      16344428..16347348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043126823.1 → XP_042982757.1  probable LRR receptor-like serine/threonine-protein kinase At3g47570

      UniProtKB/TrEMBL
      A0A8T1QIR8
      Conserved Domains (3) summary
      PLN00113
      Location:9 → 681
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:103 → 127
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:466 → 793
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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