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    IL1B interleukin 1 beta [ Cervus elaphus (red deer) ]

    Gene ID: 122703542, updated on 22-Mar-2024

    Summary

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    Gene symbol
    IL1B
    Gene description
    interleukin 1 beta
    See related
    EnsemblRapid:ENSCESG00005004039
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cervus elaphus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
    Orthologs
    human mouse all
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    Genomic context

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    See IL1B in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current mCerEla1.1 (GCF_910594005.1) 11 NC_057825.1 (58181910..58218705)

    Chromosome 11 - NC_057825.1Genomic Context describing neighboring genes Neighboring gene interleukin-37-like Neighboring gene interleukin-37-like Neighboring gene interleukin 1 alpha Neighboring gene cytoskeleton associated protein 2 like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057825.1 Chromosome 11 Reference mCerEla1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables interleukin-1 receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of immature T cell proliferation in thymus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of nitric-oxide synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interleukin-1 beta
    Names
    IL-1 beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cervus elaphus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCerEla1.1

    Genomic

    1. NC_057825.1 Reference mCerEla1.1

      Range
      58181910..58218705
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043917861.1 → XP_043773796.1  interleukin-1 beta

      UniProtKB/Swiss-Prot
      P51745
      UniProtKB/TrEMBL
      A0A212CXK4
      Conserved Domains (2) summary
      smart00125
      Location:116 → 262
      IL1; Interleukin-1 homologues
      pfam02394
      Location:1 → 100
      IL1_propep; Interleukin-1 propeptide

    2. XM_043917862.1 → XP_043773797.1  interleukin-1 beta

      UniProtKB/Swiss-Prot
      P51745
      UniProtKB/TrEMBL
      A0A212CXK4
      Related
      ENSCESP00005005472.1, ENSCEST00005006419.1
      Conserved Domains (2) summary
      smart00125
      Location:116 → 262
      IL1; Interleukin-1 homologues
      pfam02394
      Location:1 → 100
      IL1_propep; Interleukin-1 propeptide
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P51745.1 GenPept UniProtKB/Swiss-Prot:P51745

    Gene LinkOut

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