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    eef1da eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [ Siniperca chuatsi (mandarin fish) ]

    Gene ID: 122886536, updated on 22-Mar-2024

    Summary

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    Gene symbol
    eef1da
    Gene description
    eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein)
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Siniperca chuatsi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
    Orthologs
    zebrafish all
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    Genomic context

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    See eef1da in Genome Data Viewer
    Location:
    chromosome: LG13
    Exon count:
    11
    Annotation release Status Assembly LG Location
    100 current ASM2008510v1 (GCF_020085105.1) LG13 NC_058054.1 (10977550..10987465)

    Linkage Group LG13 - NC_058054.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase activating polypeptide 1a (pituitary) receptor type I Neighboring gene growth hormone releasing hormone receptor a Neighboring gene uncharacterized LOC122886534 Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like Neighboring gene finTRIM family, member 67

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058054.1 Chromosome LG13 Reference ASM2008510v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of eukaryotic translation elongation factor 1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2008510v1 Primary Assembly

    Genomic

    1. NC_058054.1 Reference ASM2008510v1 Primary Assembly

      Range
      10977550..10987465
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044218863.1 → XP_044074798.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X6

      Conserved Domains (1) summary
      cd00292
      Location:172 → 260
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...

    2. XM_044218865.1 → XP_044074800.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X8

      Conserved Domains (1) summary
      cd00292
      Location:153 → 241
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...

    3. XM_044218856.1 → XP_044074791.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X1

      Conserved Domains (1) summary
      cd00292
      Location:386 → 474
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...

    4. XM_044218862.1 → XP_044074797.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X5

      Conserved Domains (1) summary
      cd00292
      Location:179 → 267
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...

    5. XM_044218864.1 → XP_044074799.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X7

      Conserved Domains (1) summary
      cd00292
      Location:160 → 248
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...

    6. XM_044218857.1 → XP_044074792.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X1

      Conserved Domains (1) summary
      cd00292
      Location:386 → 474
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...

    7. XM_044218860.1 → XP_044074795.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X3

      Conserved Domains (1) summary
      cd00292
      Location:367 → 455
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...

    8. XM_044218859.1 → XP_044074794.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X2

      Conserved Domains (1) summary
      cd00292
      Location:374 → 462
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...

    9. XM_044218861.1 → XP_044074796.1  eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) isoform X4

      Conserved Domains (1) summary
      cd00292
      Location:355 → 443
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...
    Nucleotide Protein
    Heading Accession and Version

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