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    LOC124046078 retinoic acid receptor gamma-A [ Oncorhynchus gorbuscha (pink salmon) ]

    Gene ID: 124046078, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC124046078
    Gene description
    retinoic acid receptor gamma-A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus gorbuscha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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    Genomic context

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    See LOC124046078 in Genome Data Viewer
    Location:
    chromosome: LG10
    Exon count:
    12
    Annotation release Status Assembly LG Location
    100 current OgorEven_v1.0 (GCF_021184085.1) LG10 NC_060182.1 (39679431..39772494, complement)

    Linkage Group LG10 - NC_060182.1Genomic Context describing neighboring genes Neighboring gene homeobox protein Hox-C13a Neighboring gene calcium-binding and coiled-coil domain-containing protein 1-like Neighboring gene nuclear receptor subfamily 1 group D member 1-like Neighboring gene molybdate-anion transporter-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_060182.1 Chromosome LG10 Reference OgorEven_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear glucocorticoid receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to corticotropin-releasing hormone stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retinoic acid receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    retinoic acid receptor gamma-A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OgorEven_v1.0 Primary Assembly

    Genomic

    1. NC_060182.1 Reference OgorEven_v1.0 Primary Assembly

      Range
      39679431..39772494 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046366063.1 → XP_046222019.1  retinoic acid receptor gamma-A isoform X4

    2. XM_046366061.1 → XP_046222017.1  retinoic acid receptor gamma-A isoform X3

    3. XM_046366060.1 → XP_046222016.1  retinoic acid receptor gamma-A isoform X2

    4. XM_046366057.1 → XP_046222013.1  retinoic acid receptor gamma-A isoform X1

    5. XM_046366059.1 → XP_046222015.1  retinoic acid receptor gamma-A isoform X1

    6. XM_046366058.1 → XP_046222014.1  retinoic acid receptor gamma-A isoform X1

    7. XM_046366064.1 → XP_046222020.1  retinoic acid receptor gamma-A isoform X5

    8. XM_046366065.1 → XP_046222021.1  retinoic acid receptor gamma-A isoform X6

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases