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    LOC124904333 octapeptide-repeat protein T2 [ Homo sapiens (human) ]

    Gene ID: 124904333, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC124904333
    Gene description
    octapeptide-repeat protein T2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC124904333 in Genome Data Viewer
    Location:
    18q23
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (79419249..79422903)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (79672913..79676567)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene ATPase phospholipid transporting 9B (putative) Neighboring gene uncharacterized LOC124904332 Neighboring gene histidine-rich protein PFHRP-II-like Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:77121413-77122612 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:77138853-77139403 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:77140873-77141374 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:77152806-77153331 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:77153332-77153856 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9570 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13538 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9571 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:77156322-77156869 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9573 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9574 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13539 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:77165018-77165613 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:77166804-77167397 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:77167420-77167581 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:77171165-77171680 Neighboring gene uncharacterized LOC124904334 Neighboring gene nuclear factor of activated T cells 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:77203425-77204271 Neighboring gene uncharacterized LOC101927897 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13540 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9575 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13541

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    General protein information

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    Preferred Names
    octapeptide-repeat protein T2; uncharacterized protein LOC124904333

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      79419249..79422903
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047437989.1 → XP_047293945.1  uncharacterized protein LOC124904333

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      79672913..79676567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047446867.1 → XP_047302823.1  octapeptide-repeat protein T2

    Nucleotide Protein
    Heading Accession and Version

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