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    RILPL2 Rab interacting lysosomal protein like 2 [ Corvus hawaiiensis (hawaiian crow) ]

    Gene ID: 125335590, updated on 3-Aug-2024

    Summary

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    Gene symbol
    RILPL2
    Gene description
    Rab interacting lysosomal protein like 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corvus hawaiiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
    Orthologs
    human mouse all
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    Genomic context

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    See RILPL2 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current bCorHaw1.pri.cur (GCF_020740725.1) 18 NC_063230.1 (12962425..12966897, complement)

    Chromosome 18 - NC_063230.1Genomic Context describing neighboring genes Neighboring gene strawberry notch homolog 1 Neighboring gene lysine methyltransferase 5A Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 35 Neighboring gene Rab interacting lysosomal protein like 1 Neighboring gene transmembrane p24 trafficking protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_063230.1 Chromosome 18 Reference bCorHaw1.pri.cur Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RILP-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corvus hawaiiensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCorHaw1.pri.cur Primary Assembly

    Genomic

    1. NC_063230.1 Reference bCorHaw1.pri.cur Primary Assembly

      Range
      12962425..12966897 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048323321.1 → XP_048179278.1  RILP-like protein 2 isoform X2

    2. XM_048323320.1 → XP_048179277.1  RILP-like protein 2 isoform X1

    RNA

    1. XR_007207491.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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