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    LOC126851813 minor histocompatibility antigen H13 [ Cataglyphis hispanica ]

    Gene ID: 126851813, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC126851813
    Gene description
    minor histocompatibility antigen H13
    See related
    EnsemblRapid:LOC126851813
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cataglyphis hispanica
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Cataglyphis
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See LOC126851813 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current ULB_Chis1_1.0 (GCF_021464435.1) 8 NC_065961.1 (8290109..8292983, complement)

    Chromosome 8 - NC_065961.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126851812 Neighboring gene proteasome subunit beta type-2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_065961.1 Chromosome 8 Reference ULB_Chis1_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aspartic endopeptidase activity, intramembrane cleaving IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in membrane protein proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal peptide processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic side of endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lumenal side of endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    minor histocompatibility antigen H13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cataglyphis hispanica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ULB_Chis1_1.0

    Genomic

    1. NC_065961.1 Reference ULB_Chis1_1.0

      Range
      8290109..8292983 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_050596160.1 → XP_050452117.1  minor histocompatibility antigen H13

      Related
      XP_050452117.1, XM_050596160.1
    Nucleotide Protein
    Heading Accession and Version

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