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    foxj2 forkhead box J2 [ Lampris incognitus (smalleye Pacific opah) ]

    Gene ID: 130118691, updated on 8-May-2024

    Summary

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    Gene symbol
    foxj2
    Gene description
    forkhead box J2
    See related
    EnsemblRapid:ENSLING00000001876
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lampris incognitus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Lampriformes; Lampridae; Lampris
    Orthologs
    zebrafish all
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    Genomic context

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    See foxj2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_05 current fLamInc1.hap2 (GCF_029633865.1) 9 NC_079219.1 (59143019..59152482)

    Chromosome 9 - NC_079219.1Genomic Context describing neighboring genes Neighboring gene ATG12 autophagy related 12 homolog (S. cerevisiae) Neighboring gene isochorismatase domain containing 2 Neighboring gene epsin 1a Neighboring gene SH3 domain binding kinase family, member 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_079219.1 Chromosome 9 Reference fLamInc1.hap2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein D3-A; forkhead box protein J2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029633865.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLamInc1.hap2

    Genomic

    1. NC_079219.1 Reference fLamInc1.hap2

      Range
      59143019..59152482
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056287139.1 → XP_056143114.1  forkhead box protein D3-A isoform X3

    2. XM_056287138.1 → XP_056143113.1  forkhead box protein J2 isoform X2

    3. XM_056287137.1 → XP_056143112.1  forkhead box protein J2 isoform X1

      Related
      ENSLINP00000003568.1, ENSLINT00000003622.2
    Nucleotide Protein
    Heading Accession and Version

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