U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    slc4a2a solute carrier family 4 member 2a [ Triplophysa dalaica ]

    Gene ID: 130417674, updated on 27-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    slc4a2a
    Gene description
    solute carrier family 4 member 2a
    See related
    EnsemblRapid:ENSTDLG00000024049
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Triplophysa dalaica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
    Orthologs
    zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See slc4a2a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    RS_2023_06 current ASM1584641v1 (GCF_015846415.1) 3 NC_079544.1 (6284700..6307814)

    Chromosome 3 - NC_079544.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD89 Neighboring gene ATP-binding cassette, sub-family F (GCN20), member 2a Neighboring gene Fas apoptotic inhibitory molecule 2a Neighboring gene tetratricopeptide repeat domain 19 Neighboring gene upstream binding transcription factor, like Neighboring gene ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_079544.1 Chromosome 3 Reference ASM1584641v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic anion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables solute:inorganic anion antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bicarbonate transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic anion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of intracellular pH IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in basolateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    anion exchange protein 2a
    Names
    solute carrier 4 member 2a

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_015846415.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1584641v1 Primary Assembly

    Genomic

    1. NC_079544.1 Reference ASM1584641v1 Primary Assembly

      Range
      6284700..6307814
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056743366.1 → XP_056599344.1  anion exchange protein 2a isoform X1

    2. XM_056743369.1 → XP_056599347.1  anion exchange protein 2a isoform X2

      Related
      ENSTDLP00000046103.1, ENSTDLT00000049685.1

    3. XM_056743370.1 → XP_056599348.1  anion exchange protein 2a isoform X3

      Related
      ENSTDLP00000046033.1, ENSTDLT00000049479.1

    4. XM_056743368.1 → XP_056599346.1  anion exchange protein 2a isoform X1

      Related
      ENSTDLP00000046066.1, ENSTDLT00000049590.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases