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    spire1a spire-type actin nucleation factor 1a [ Hemibagrus wyckioides ]

    Gene ID: 131362632, updated on 28-Mar-2024

    Summary

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    Gene symbol
    spire1a
    Gene description
    spire-type actin nucleation factor 1a
    Locus tag
    KOW79_010684
    See related
    EnsemblRapid:ENSHWYG00000002246
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hemibagrus wyckioides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Hemibagrus
    Orthologs
    zebrafish all
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    Genomic context

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    See spire1a in Genome Data Viewer
    Location:
    chromosome: LG12
    Exon count:
    18
    Annotation release Status Assembly LG Location
    RS_2023_07 current SWU_Hwy_1.0 (GCF_019097595.1) LG12 NC_080721.1 (6153221..6197287)

    Linkage Group LG12 - NC_080721.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:ch211-215i13.3 Neighboring gene ATPase H+ transporting V1 subunit C1b Neighboring gene kelch-like family member 38a Neighboring gene family with sequence similarity 91 member A1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_080721.1 Chromosome LG12 Reference SWU_Hwy_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi vesicle transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cleavage furrow formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of meiotic spindle localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in polar body extrusion after meiotic divisions IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein spire homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_019097595.1-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SWU_Hwy_1.0 Primary Assembly

    Genomic

    1. NC_080721.1 Reference SWU_Hwy_1.0 Primary Assembly

      Range
      6153221..6197287
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058404786.1 → XP_058260769.1  protein spire homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A9D3SNG1
      Related
      ENSHWYP00000004146.1, ENSHWYT00000004528.1

    2. XM_058404787.1 → XP_058260770.1  protein spire homolog 1 isoform X2

      Related
      ENSHWYP00000004154.1, ENSHWYT00000004536.1

    3. XM_058404788.1 → XP_058260771.1  protein spire homolog 1 isoform X3

      Related
      ENSHWYP00000004159.1, ENSHWYT00000004541.1
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases