U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    DCLK1 doublecortin like kinase 1 [ Poecile atricapillus (Black-capped chickadee) ]

    Gene ID: 131574678, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    DCLK1
    Gene description
    doublecortin like kinase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Poecile atricapillus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Poecile
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DCLK1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2023_08 current bPoeAtr1.hap1 (GCF_030490865.1) 1 NC_081249.1 (66193410..66423973)

    Chromosome 1 - NC_081249.1Genomic Context describing neighboring genes Neighboring gene cyclin A1 Neighboring gene coiled-coil domain containing 169 Neighboring gene spartin Neighboring gene uncharacterized LOC131590342 Neighboring gene uncharacterized LOC131590345 Neighboring gene neurobeachin

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_081249.1 Chromosome 1 Reference bPoeAtr1.hap1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in photoreceptor cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retina development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    serine/threonine-protein kinase DCLK1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_030490865.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bPoeAtr1.hap1 Primary Assembly

    Genomic

    1. NC_081249.1 Reference bPoeAtr1.hap1 Primary Assembly

      Range
      66193410..66423973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058829307.1 → XP_058685290.1  serine/threonine-protein kinase DCLK1 isoform X2

    2. XM_058829306.1 → XP_058685289.1  serine/threonine-protein kinase DCLK1 isoform X1

    3. XM_058829308.1 → XP_058685291.1  serine/threonine-protein kinase DCLK1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.