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    AP-1sigma AP-1 complex subunit sigma-2 [ Achroia grisella ]

    Gene ID: 131848673, updated on 24-May-2024

    Summary

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    Gene symbol
    AP-1sigma
    Gene description
    AP-1 complex subunit sigma-2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Achroia grisella
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Pyraloidea; Pyralidae; Galleriinae; Achroia
    Orthologs
    fruit fly all
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    Genomic context

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    See AP-1sigma in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_08 current CSIRO_AGI_Agris_v1 (GCF_030625045.1) Unplaced Scaffold NW_026712947.1 (338885..351207, complement)

    NW_026712947.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131848707 Neighboring gene Lipid storage droplet-2 Neighboring gene F-box only protein 9 Neighboring gene diacylglycerol kinase theta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026712947 Unplaced Scaffold Reference CSIRO_AGI_Agris_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-1 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-1 complex subunit sigma-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030625045.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CSIRO_AGI_Agris_v1 Primary Assembly

    Genomic

    1. NW_026712947.1 Reference CSIRO_AGI_Agris_v1 Primary Assembly

      Range
      338885..351207 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059198597.1 → XP_059054580.1  AP-1 complex subunit sigma-2 isoform X1

    2. XM_059198598.1 → XP_059054581.1  AP-1 complex subunit sigma-2 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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