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    LOC132661355 hemoglobin subunit beta-1 [ Panthera onca (jaguar) ]

    Gene ID: 132661355, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC132661355
    Gene description
    hemoglobin subunit beta-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Panthera onca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
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    Genomic context

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    See LOC132661355 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current Panthera_onca_HiC (GCF_028533385.1) 13 NC_083307.1 (56821699..56823044, complement)

    Chromosome 13 - NC_083307.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 52A5-like Neighboring gene olfactory receptor 52A1-like Neighboring gene hemoglobin subunit epsilon-2 Neighboring gene hemoglobin subunit epsilon 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_083307.1 Chromosome 13 Reference Panthera_onca_HiC Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables haptoglobin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hemoglobin alpha binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables organic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen carrier activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oxygen transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in blood microparticle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of haptoglobin-hemoglobin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of hemoglobin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hemoglobin subunit beta-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028533385.1-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Panthera_onca_HiC Primary Assembly

    Genomic

    1. NC_083307.1 Reference Panthera_onca_HiC Primary Assembly

      Range
      56821699..56823044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060605809.1 → XP_060461792.1  hemoglobin subunit beta-1

      UniProtKB/Swiss-Prot
      P68049
    Nucleotide Protein
    Heading Accession and Version