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    LOC133657835 paired box protein Pax-2-B-like [ Entelurus aequoreus (snake pipefish) ]

    Gene ID: 133657835, updated on 4-Jan-2024

    Summary

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    Gene symbol
    LOC133657835
    Gene description
    paired box protein Pax-2-B-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Entelurus aequoreus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Entelurus
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    Genomic context

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    See LOC133657835 in Genome Data Viewer
    Location:
    chromosome: LG09
    Exon count:
    7
    Annotation release Status Assembly LG Location
    RS_2023_12 current RoL_Eaeq_v1.1 (GCF_033978785.1) LG09 NC_084739.1 (11035119..11080461, complement)

    Linkage Group LG09 - NC_084739.1Genomic Context describing neighboring genes Neighboring gene CUE domain containing 2 Neighboring gene hypoxia inducible factor 1 subunit alpha inhibitor Neighboring gene paired box 2a Neighboring gene uncharacterized LOC133657112 Neighboring gene carbohydrate (chondroitin 6) sulfotransferase 3a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_084739.1 Chromosome LG09 Reference RoL_Eaeq_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: paired box protein Pax-2-B-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_033978785.1-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RoL_Eaeq_v1.1

    Genomic

    1. NC_084739.1 Reference RoL_Eaeq_v1.1

      Range
      11035119..11080461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_062059618.1 → XP_061915602.1  LOW QUALITY PROTEIN: paired box protein Pax-2-B-like

    Nucleotide Protein
    Heading Accession and Version