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    LOC137184679 rhodopsin [ Thunnus thynnus (Atlantic bluefin tuna) ]

    Gene ID: 137184679, updated on 3-Sep-2024

    Summary

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    Gene symbol
    LOC137184679
    Gene description
    rhodopsin
    See related
    EnsemblRapid:ENSTTHG00005016412
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Thunnus thynnus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus
    Also known as
    rhod
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    Genomic context

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    See LOC137184679 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_07 current fThuThy2.1 (GCF_963924715.1) 6 NC_089522.1 (21614398..21616001, complement)

    Chromosome 6 - NC_089522.1Genomic Context describing neighboring genes Neighboring gene membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like Neighboring gene renin Neighboring gene uncharacterized LOC137184681 Neighboring gene prickle-like protein 2 Neighboring gene uncharacterized LOC137185272

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_089522.1 Chromosome 6 Reference fThuThy2.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled photoreceptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to light stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phototransduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in photoreceptor outer segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rhodopsin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_963924715.1-RS_2024_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fThuThy2.1

    Genomic

    1. NC_089522.1 Reference fThuThy2.1

      Range
      21614398..21616001 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_067592579.1 → XP_067448680.1  rhodopsin

      Related
      ENSTTHP00005023575.1, ENSTTHT00005025527.1
    Nucleotide Protein
    Heading Accession and Version

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