U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    DFA_04557 transcription factor Dp-2 [ Cavenderia fasciculata ]

    Gene ID: 14874503, updated on 28-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    DFA_04557
    Gene description
    transcription factor Dp-2
    Locus tag
    DFA_04557
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cavenderia fasciculata (isolate: SH3)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Acytosteliales; Cavenderiaceae; Cavenderia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DFA_04557 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_004457734.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene cellulose-binding domain-containing protein Neighboring gene FKBP-type peptidylprolyl cis-trans isomerase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_004457734.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription factor Dp-2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_004457734.1 Reference assembly

      Range
      839365..840998 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004360229.1 → XP_004360286.1  transcription factor Dp-2 [Cavenderia fasciculata]

      See identical proteins and their annotated locations for XP_004360286.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F4PPX2
      Conserved Domains (2) summary
      cd14458
      Location:292 → 399
      DP_DD; Dimerization domain of DP
      pfam02319
      Location:206 → 285
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases