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    htt-1 HunTingTin gene family member;Serine/threonine-protein kinase TOR [ Caenorhabditis elegans ]

    Gene ID: 181204, updated on 18-Sep-2024

    Summary

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    Official Symbol
    htt-1
    Official Full Name
    HunTingTin gene family member;Serine/threonine-protein kinase TOR
    Primary source
    WormBase:WBGene00009027
    Locus tag
    CELE_F21G4.6
    See related
    AllianceGenome:WB:WBGene00009027
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in nucleus. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in Huntington's disease and Parkinson's disease. Orthologous to human HTT (huntingtin). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See htt-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    28
    Sequence:
    Chromosome: X; NC_003284.9 (9908794..9917448, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene PHD-type domain-containing protein Neighboring gene ncRNA Neighboring gene C2H2-type domain-containing protein Neighboring gene FOLate Receptor homolog Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    HunTingTin gene family member;Serine/threonine-protein kinase TOR
    NP_001417862.1
    • Product from WormBase gene class htt;
      Confirmed by transcript evidence
    NP_001417863.1
    • Product from WormBase gene class htt;
      Confirmed by transcript evidence
    NP_001417864.1
    • Product from WormBase gene class htt;
      Confirmed by transcript evidence
    NP_001417865.1
    • Product from WormBase gene class htt;
      Confirmed by transcript evidence
    NP_001417866.1
    • Product from WormBase gene class htt;
      Confirmed by transcript evidence
    NP_509663.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      9908794..9917448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077262.5 → NP_509663.3  Serine/threonine-protein kinase TOR [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509663.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q93547

    2. NM_001430926.1 → NP_001417864.1  HunTingTin gene family member [Caenorhabditis elegans]

      Status: REVIEWED

    3. NM_001430925.1 → NP_001417862.1  HunTingTin gene family member [Caenorhabditis elegans]

      Status: REVIEWED

    4. NM_001430927.1 → NP_001417866.1  HunTingTin gene family member [Caenorhabditis elegans]

      Status: REVIEWED

    5. NM_001430928.1 → NP_001417863.1  HunTingTin gene family member [Caenorhabditis elegans]

      Status: REVIEWED

    6. NM_001430929.1 → NP_001417865.1  HunTingTin gene family member [Caenorhabditis elegans]

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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