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    TRIREDRAFT_74223 glycoside hydrolase family 11 [ Trichoderma reesei QM6a ]

    Gene ID: 18488311, updated on 17-May-2024

    Summary

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    Gene symbol
    TRIREDRAFT_74223
    Gene description
    glycoside hydrolase family 11
    Locus tag
    TRIREDRAFT_74223
    See related
    FungiDB:TRIREDRAFT_74223; VEuPathDB:TRIREDRAFT_74223
    Gene type
    protein coding
    RNA name
    glycoside hydrolase family 11
    RefSeq status
    PROVISIONAL
    Organism
    Trichoderma reesei QM6a (strain: QM6a, type-material: type material of Trichoderma reesei)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma
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    Genomic context

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    See TRIREDRAFT_74223 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_006711148.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene glycoside hydrolase family 28

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006711148.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Martinez D, et al. Nat Biotechnol, 2008 May. PMID 18454138
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in xylan catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycoside hydrolase family 11
    XP_006961811.1
    • xylanase 1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006711148.1 Reference assembly

      Range
      2489251..2490031 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006961749.1 → XP_006961811.1  glycoside hydrolase family 11 [Trichoderma reesei QM6a]

      See identical proteins and their annotated locations for XP_006961811.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A0A024RZA6, G0R947, P36218
      Conserved Domains (1) summary
      pfam00457
      Location:53 → 224
      Glyco_hydro_11; Glycosyl hydrolases family 11
    Protein Accession Links
    GenPept Link UniProtKB Link
    EGR52985.1
    G0R947.1

    Gene LinkOut

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    Molecular Biology Databases