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    glb-25 Globin domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188156, updated on 2-Nov-2024

    Summary

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    Official Symbol
    glb-25
    Official Full Name
    Globin domain-containing protein
    Primary source
    WormBase:WBGene00020279
    Locus tag
    CELE_T06A1.4
    See related
    AllianceGenome:WB:WBGene00020279
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Is expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See glb-25 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (1944955..1953742)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Glycosyltransferase family 92 protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family. Hoogewijs D, et al. BMC Genomics, 2007 Oct 4. PMID 17916248, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxygen binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxygen carrier activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in oxygen transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in response to hypoxia IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Globin domain-containing protein
    NP_001300185.1
    • Confirmed by transcript evidence
    NP_001300186.1
    • Confirmed by transcript evidence
    NP_503535.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      1944955..1953742
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071134.6 → NP_503535.2  Globin domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503535.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EGB6
      Conserved Domains (1) summary
      cd14766
      Location:41 → 183
      CeGLB25-like; Caenorhabditis elegans globin GLB-25, and related globins

    2. NM_001313256.3 → NP_001300185.1  Globin domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ASU6
      Conserved Domains (1) summary
      cl21461
      Location:1 → 125
      Globin-like; Globin-like protein superfamily

    3. NM_001313257.3 → NP_001300186.1  Globin domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AV45
      Conserved Domains (1) summary
      cl21461
      Location:43 → 185
      Globin-like; Globin-like protein superfamily
    Nucleotide Protein
    Heading Accession and Version

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