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    L198_03201 prephenate dehydratase [ Tsuchiyaea wingfieldii CBS 7118 ]

    Gene ID: 30192414, updated on 21-Dec-2023

    Summary

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    Gene symbol
    L198_03201
    Gene description
    prephenate dehydratase
    Locus tag
    L198_03201
    Gene type
    protein coding
    RNA name
    prephenate dehydratase
    RefSeq status
    PROVISIONAL
    Organism
    Tsuchiyaea wingfieldii CBS 7118 (strain: CBS 7118, culture-collection: CBS:7118)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Tsuchiyaea
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    Genomic context

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    See L198_03201 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_017567034.1Genomic Context describing neighboring genes Neighboring gene 50S small subunit ribosomal protein L34e Neighboring gene hypothetical protein Neighboring gene 40S ribosomal protein S30 Neighboring gene AGC/NDR/NDR protein kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017567034.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables prephenate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-phenylalanine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    prephenate dehydratase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_017567034.1 Reference assembly

      Range
      73174..74280 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019175333.1 → XP_019032436.1  prephenate dehydratase [Tsuchiyaea wingfieldii CBS 7118]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1E3JER1
      Conserved Domains (1) summary
      pfam00800
      Location:16 → 206
      PDT; Prephenate dehydratase
    Nucleotide Protein
    Heading Accession and Version

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