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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163447.1 → NP_001156919.1 C-Jun-amino-terminal kinase-interacting protein 3 isoform b
See identical proteins and their annotated locations for NP_001156919.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region compared to variant 1. This results in a shorter protein (isoform b) compared to isoform a.
- Source sequence(s)
-
AC166102
- Consensus CDS
-
CCDS50024.1
- UniProtKB/TrEMBL
-
Q6NV54
- Related
- ENSMUSP00000114084.2, ENSMUST00000120035.8
- Conserved Domains (3) summary
-
- pfam07926
Location:61 → 167
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- pfam09744
Location:30 → 183
- Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
- pfam16471
Location:416 → 484
- JIP_LZII; JNK-interacting protein leucine zipper II
-
NM_001163448.1 → NP_001156920.1 C-Jun-amino-terminal kinase-interacting protein 3 isoform c
See identical proteins and their annotated locations for NP_001156920.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the 5' coding region compared to variant 1. This results in a shorter protein (isoform c) compared to isoform a.
- Source sequence(s)
-
AC166102, AF178636, BM899006, CO433928
- Consensus CDS
-
CCDS50025.1
- UniProtKB/TrEMBL
-
Q6NV54
- Related
- ENSMUSP00000110883.3, ENSMUST00000115228.9
- Conserved Domains (3) summary
-
- pfam07926
Location:61 → 167
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- pfam09744
Location:30 → 183
- Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
- pfam16471
Location:411 → 479
- JIP_LZII; JNK-interacting protein leucine zipper II
-
NM_001163449.1 → NP_001156921.1 C-Jun-amino-terminal kinase-interacting protein 3 isoform d
See identical proteins and their annotated locations for NP_001156921.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains an alternate in-frame exon and uses an alternate in-frame splice site in the 5' coding region compared to variant 1. This results in a shorter protein (isoform d) compared to isoform a.
- Source sequence(s)
-
AC166102, BC060603
- Consensus CDS
-
CCDS50029.1
- UniProtKB/TrEMBL
-
Q6P1F1
- Related
- ENSMUSP00000112712.2, ENSMUST00000117509.8
- Conserved Domains (3) summary
-
- pfam07926
Location:61 → 167
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- pfam09744
Location:30 → 183
- Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
- pfam16471
Location:394 → 462
- JIP_LZII; JNK-interacting protein leucine zipper II
-
NM_001163450.1 → NP_001156922.1 C-Jun-amino-terminal kinase-interacting protein 3 isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice site in the 5' coding region compared to variant 1. This results in a shorter protein (isoform e) compared to isoform a.
- Source sequence(s)
-
AC166102
- Consensus CDS
-
CCDS50028.1
- UniProtKB/TrEMBL
- E9Q6E0, Q6P1F1
- Related
- ENSMUSP00000113698.2, ENSMUST00000121723.8
- Conserved Domains (3) summary
-
- pfam07926
Location:61 → 167
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- pfam09744
Location:30 → 183
- Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
- pfam16471
Location:386 → 454
- JIP_LZII; JNK-interacting protein leucine zipper II
-
NM_001163451.1 → NP_001156923.1 C-Jun-amino-terminal kinase-interacting protein 3 isoform f
See identical proteins and their annotated locations for NP_001156923.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) uses two alternate in-frame splice sites in the 5' coding region compared to variant 1. This results in a shorter protein (isoform f) compared to isoform a.
- Source sequence(s)
-
AC166102
- Consensus CDS
-
CCDS50026.1
- UniProtKB/TrEMBL
-
Q6P1F1
- Related
- ENSMUSP00000112955.2, ENSMUST00000119115.8
- Conserved Domains (3) summary
-
- pfam07926
Location:61 → 167
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- pfam09744
Location:30 → 183
- Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
- pfam16471
Location:385 → 453
- JIP_LZII; JNK-interacting protein leucine zipper II
-
NM_001163453.1 → NP_001156925.1 C-Jun-amino-terminal kinase-interacting protein 3 isoform g
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) uses an alternate in-frame splice site and lacks an alternate in-frame exon in the 5' coding region compared to variant 1. This results in a shorter protein (isoform g) compared to isoform a.
- Source sequence(s)
-
AC166102, BC065105
- Consensus CDS
-
CCDS50027.1
- UniProtKB/TrEMBL
- E9Q6B6, Q6P1F1
- Related
- ENSMUSP00000113753.2, ENSMUST00000121787.8
- Conserved Domains (3) summary
-
- pfam07926
Location:61 → 167
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- pfam09744
Location:30 → 183
- Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
- pfam16471
Location:380 → 448
- JIP_LZII; JNK-interacting protein leucine zipper II
-
NM_013931.4 → NP_038959.2 C-Jun-amino-terminal kinase-interacting protein 3 isoform a
See identical proteins and their annotated locations for NP_038959.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AC166102, AF262046, AK134797, BM899006
- Consensus CDS
-
CCDS37498.1
- UniProtKB/Swiss-Prot
- Q5D062, Q99KU7, Q9EQD8, Q9ESN7, Q9ESN8, Q9ESN9, Q9ESP0, Q9JLH2, Q9JLH3, Q9R0U7
- UniProtKB/TrEMBL
- Q3UHB5, Q6NV54
- Related
- ENSMUSP00000085683.6, ENSMUST00000088345.12
- Conserved Domains (3) summary
-
- pfam07926
Location:61 → 167
- TPR_MLP1_2; TPR/MLP1/MLP2-like protein
- pfam09744
Location:30 → 183
- Jnk-SapK_ap_N; JNK_SAPK-associated protein-1
- pfam16471
Location:417 → 485
- JIP_LZII; JNK-interacting protein leucine zipper II
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000083.7 Reference GRCm39 C57BL/6J
- Range
-
25116480..25155951 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)