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    atpH ATPase III subunit [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 3131392, updated on 10-Oct-2024

    Summary

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    Gene symbol
    atpH
    Gene description
    ATPase III subunit
    Locus tag
    OrsajCp020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Oryza sativa Japonica Group (cultivar: Nipponbare)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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    Genomic context

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    See atpH in Genome Data Viewer
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) Plastid (non-nuclear) NC_001320.1 (32039..32284)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) Plastid (non-nuclear) NC_001320.1 (32039..32284)

    NC_001320.1Genomic Context describing neighboring genes Neighboring gene 30S ribosomal protein S2 Neighboring gene ATPase IV subunit Neighboring gene ATPase subunit I Neighboring gene ATP synthase CF1 alpha chain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Hiratsuka J, et al. Mol Gen Genet, 1989 Jun. PMID 2770692
    2. A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae). Morton BR, et al. Curr Genet, 1993 Oct. PMID 8252646
    3. Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes. Shimada H, et al. Nucleic Acids Res, 1991 Mar 11. PMID 1708498, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ATPase III subunit
    Names
    ATP synthase CF0 C subunit
    NP_039378.1
    • ATP synthase CF0 C chain

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001320.1 Reference assembly

      Range
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_039378.1 ATP synthase CF0 C subunit [Oryza sativa Japonica Group]

      See identical proteins and their annotated locations for NP_039378.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P00843, P0C2Z9, P0C300, P0C301, P69450, Q33180, Q6QY78, Q7G7F1, Q9XPT1
      UniProtKB/TrEMBL
      A0A0K0LLB7, A0A0N9E0S4, A0A0N9E0Z6, A0A7S7YAA1, E9KIN6, J7EXL1
      Conserved Domains (1) summary
      CHL00061
      Location:1 → 81
      atpH; ATP synthase CF0 C subunit
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C301.1

    Gene LinkOut

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    Other Literature Sources
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    Research Materials