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    LINC00705 long intergenic non-protein coding RNA 705 [ Homo sapiens (human) ]

    Gene ID: 338588, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC00705provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 705provided by HGNC
    Primary source
    HGNC:HGNC:27874
    See related
    Ensembl:ENSG00000225269 AllianceGenome:HGNC:27874
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC00705 in Genome Data Viewer
    Location:
    10p15.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (4656156..4662419)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (4658578..4664842)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (4698348..4704611)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376372 Neighboring gene Sharpr-MPRA regulatory region 7156 Neighboring gene long intergenic non-protein coding RNA 703 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:4449652-4450851 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:4473152-4474351 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2922 Neighboring gene RNA, U6 small nuclear 163, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:4599913-4600414 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:4649568-4650068 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:4703529-4704512 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:4704879-4706078 Neighboring gene uncharacterized LOC105376373 Neighboring gene mitotically associated long non coding RNA Neighboring gene uncharacterized LOC105376375 Neighboring gene uncharacterized LOC107984197

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_015425.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC040895, BC104742
      Related
      ENST00000663142.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      4656156..4662419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      4658578..4664842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)