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    Tc00.1047053506925.520 hypothetical protein [ Trypanosoma cruzi ]

    Gene ID: 3554504, updated on 29-Oct-2024

    Summary

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    Gene symbol
    Tc00.1047053506925.520
    Gene description
    hypothetical protein
    Locus tag
    Tc00.1047053506925.520
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma cruzi (strain: CL Brener)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
    Orthologs
    Trypanosoma brucei all
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    Genomic context

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    See Tc00.1047053506925.520 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001849559.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene RNA processing factor 1, putative Neighboring gene ABC transporter, putative Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001849559.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
    2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Miscellaneous features

    • Loc: 273273-273466 areas merged during assembly that could not be assigned to a particular haplotype. This can correspond to areas where the two haplotypes were merged or to regions with more than two copies in the genome that were merged during assembly.

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of angiogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_821596.1
    • homozygous allele located in a merged assembly of Esmeraldo and non-Esmeraldo homologous sequences or a repetitive gene whose different copies were merged during the assembly.

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001849559.1 Reference assembly

      Range
      272750..274171
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_816503.1 → XP_821596.1  hypothetical protein, conserved [Trypanosoma cruzi]

      See identical proteins and their annotated locations for XP_821596.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2V2XHY5, Q4E4K0
      Conserved Domains (1) summary
      pfam14822
      Location:25 → 209
      Vasohibin; Vasohibin
    Nucleotide Protein
    Heading Accession and Version

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